Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808754.1_cds_XP_016495485.1_9798
CDS Infomation

[gene=LOC107814560] [db_xref=GeneID:107814560] [protein=autophagy-related protein 18a-like] [protein_id=XP_016495485.1] [location=join(16044..16973,17809..18016,21249..21375,21520..21610)] [gbkey=CDS]
Sequence

ATGACCTCTACCCTCCCTTCCTCCTCCCCTTGGCCCGATTCCAACTCTTTCGTTGCCCCT
CACATGTCGGAAAATTCACCTCAAGCTCTAGAATCCGATGATCGTTCCTCTCTCTCTGAC
CTCTCCGATATCTCCTCCGCCATCACTGCCGCCACAGCTGATAATGCTGAACACCGCGCT
GAAACCTCCGTTACCTCCCCTGCTGCCGCCGCTACTACTCCTACTACCGTACAGAATATT
AACCCTAATCCTACTTCAATTTCTCTTCCCGTTGATTCTTCTACCCCGAATATCCTCTAC
CTTTCCTTCAACCAGGATCACGGTTGCTTTGCGGCGGGCACCGATCGCGGGTTCCGGATC
TACAACTGCGACCCGCTTCGCGAGATTTTCCGCCGCGATTTTGCCGGTAATGCTAATGGC
GGAGGTGGAATTTGTGTTGTTCAGATGCTTTTTCGGTGCAATATTCTGGCGTTGGTTGGA
GGTGGCCCGGAACCTCAATATCCCTTAAACAAGGTGATGATATGGGATGATCATCAATCC
AGGTGCATCGGCGAGCTGTCGTTTAGATCCGAGGTGAAATCCGTGAGGCTAAGAAGGGAT
AGAATTGTGGTTGTTTTAGCCCAGAAGATATTTGTTTACAACTTTGCGGATTTGAAGCTG
TTACATCAGATTGAGACGGTGGCAAATCCTAAGGGTTTGTGTGAGGTGTCACAGGTATCG
GGATCGATGGTTCTGGTTTGTCCGGGGCTGCAGAAGGGTCAGGTGAGAGTGGAGCATTAC
GCGTCGAAGAGGACCAAGTTTATAATGGCACATGACTCGAGGACTGTGTGTTTTGCGCTC
ACAAATGATGGGAGGTTGCTCGCTACTGCTAGCAGTAAGGGTACTCTTGTCAGAGTGTTC
AATACTTTAGATGGATCCTTGGTCCAAGAGGTCAGGAGAGGCGCAGATAGAGCAGAAATC
TATAGCCTTGCCTTTTCTTCAACTGCACAATGGCTAGCTGTTTCCAGCGATAAAGGAACT
GTCCATGTGTTCAATCTAAAGGTTGATTCAGCAGCTTTAGGAGTTGATAGGCCAAGAGGG
GCATCTGAGTCAAATGCTACATCTCCATCAGCTGTGTCTCATCTCTCCTTCATTAGAGGT
GTGCTGCCAAAGTATTTCAGCTCTGAGTGGTCTGTGGCGCAGTTCCGCTTGCAAGAAGGT
CTGCAGCACATTGTGGCCTTTGGCCACCAAAAGAATACTGTTGTGATTCTTGGCATGGAT
GGCAGTTTCTACCGATGCGAGTTTGATGCAGCAGCTGGTGGGGAGATGACCCTGTTGGAA
CATCACAGTTTCTTAAAGCCAGAGGAGAACTTCTAA

Peptide Sequence

PEP ID

XP_016495485.1
PEP Infomation

PREDICTED: autophagy-related protein 18a-like [Nicotiana tabacum]
Sequence

MTSTLPSSSPWPDSNSFVAPHMSENSPQALESDDRSSLSDLSDISSAITAATADNAEHRA
ETSVTSPAAAATTPTTVQNINPNPTSISLPVDSSTPNILYLSFNQDHGCFAAGTDRGFRI
YNCDPLREIFRRDFAGNANGGGGICVVQMLFRCNILALVGGGPEPQYPLNKVMIWDDHQS
RCIGELSFRSEVKSVRLRRDRIVVVLAQKIFVYNFADLKLLHQIETVANPKGLCEVSQVS
GSMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRTVCFALTNDGRLLATASSKGTLVRVF
NTLDGSLVQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGTVHVFNLKVDSAALGVDRPRG
ASESNATSPSAVSHLSFIRGVLPKYFSSEWSVAQFRLQEGLQHIVAFGHQKNTVVILGMD
GSFYRCEFDAAAGGEMTLLEHHSFLKPEENF

Transcript Sequence

Gene sequence data has not been registered.